João Almeida
From IEETA
| Subject | Enriching information extraction pipelines in clinical decision support systems |  |
|---|---|---|
| Advisor | José Luís Oliveira | |
| Group | Biomedical Informatics and Technologies | |
| Status | PhD student | |
| Starts | 2018/10/01 | |
| Ends | 2022/09/30 | |
| Country | Portugal | |
| Projects | EHDEN | |
| Past projects | EMIF, NETDIAMOND, RD-Connect | |
| Events | ||
| Proposals | ||
| Personal page | http://sweet.ua.pt/joao.rafael.almeida |
Contents |
Publications
Articles in international journals listed in the ISI
- João Almeida, Armando J. Pinho, José Luís Oliveira, Olga Fajarda, Diogo Pratas. GTO: A toolkit to unify pipelines in genomic and proteomic research. SoftwareX, vol. 12, p. 100535, July 2020
- Tiago Godinho, Rui Lebre, João Almeida, Carlos Costa. ETL Framework for Real-Time Business Intelligence over Medical Imaging Repositories. Journal of Digital Imaging, vol. 32, p. 870-879, October 2019 [IF 2018: 2.572 (Q2, 51/129)]
- João Almeida, Rosa Gini, Giuseppe Roberto, Peter Rijnbeek, José Luís Oliveira. TASKA: A modular task management system to support health research studies. BMC Medical Informatics and Decision Making, vol. 19, no. 1, p. 121, July 2019 [IF 2018: 2.067 (Q3, 15/26)]
Articles in conference proceedings
- João Almeida, Eriksson Monteiro, Luís Bastião Silva, Alejandro Pazos, José Luís Oliveira. A Recommender System based on Cohorts' Similarity. 30th Medical Informatics Europe conference, MIE 2020, Canceled event, April 2020
- João Figueira Silva, Rui Antunes, João Almeida, Sérgio Matos. Clinical concept normalization on medical records using word embeddings and heuristics. 30th Medical Informatics Europe conference, MIE 2020, Canceled event, April 2020
- João Almeida, Sérgio Matos. Rule-based extraction of family history information from clinical notes. The 35th ACM/SIGAPP Symposium On Applied Computing, Online event, p. 670–675, March 2020
- João Almeida, Pedro Freire, Olga Fajarda, José Luís Oliveira. A Computational Platform for Heart Failure Cases Research. Proceedings of the 13th International Joint Conference on Biomedical Engineering Systems and Technologies - Volume 5: HEALTHINF, Malta, vol. 5, p. 601-608, February 2020
- João Almeida, João Figueira Silva, Alejandro Sierra, Sérgio Matos, José Luís Oliveira. Enhancing Decision-making Systems with Relevant Patient Information by Leveraging Clinical Notes. Proceedings of the 13th International Joint Conference on Biomedical Engineering Systems and Technologies - Volume 5: HEALTHINF, vol. 5, p. 254-262, February 2020
- João Almeida, Pedro Freire, Olga Fajarda, José Luís Oliveira. A Weighted Rule-Based Model for File Forgery Detection: UA. PT Bioinformatics at ImageCLEF 2019. CLEF 2019 Working Notes, September 2019
- João Almeida, José Luís Oliveira. GenericCDSS - A Generic Clinical Decision Support System. 2019 IEEE 32st International Symposium on Computer-Based Medical Systems (CBMS), Cordoba, Spain, June 2019
- João Almeida, Olga Fajarda, Arnaldo Pereira, José Luís Oliveira. Strategies to Access Patient Clinical Data from Distributed Databases. Proceedings of the 12th International Joint Conference on Biomedical Engineering Systems and Technologies, Prague, Czech Republic, vol. 5, p. 466-473, February 2019
- João Almeida, Tiago Godinho, Luís Bastião Silva, Carlos Costa, José Luís Oliveira. Services Orchestration and Workflow Management in Distributed Medical Imaging Environments. 2018 IEEE 31st International Symposium on Computer-Based Medical Systems (CBMS), Karlstad, Sweden, p. 170-175, June 2018
- João Almeida, Joana Guimarães, José Luís Oliveira. Simplifying the digitization of clinical protocols for diabetes management. 2018 IEEE 31st International Symposium on Computer-Based Medical Systems (CBMS, Karlstad, Sweden, p. 176-181, June 2018
- João Almeida, Ricardo Ribeiro, José Luís Oliveira. A modular workflow management framework. Proceedings of the 11th International Joint Conference on Biomedical Engineering Systems and Technologies HEALTHINF, Funchal, Madeira, Portugal, vol. 5, p. 414-421, January 2018
Masters thesis
- João Almeida. Software solution management for clinical protocol. Masters Thesis, Departamento de Electrónica e Telecomunicações e Informática, Campus Universitário Santiago, Aveiro, Portugal, July 2018