Luís Bastião Silva

Subject	A federated architecture for biomedical data integration
Advisor	Carlos Costa, José Luís Oliveira
Group	Biomedical Informatics and Technologies
Status	PhD student
Starts	2011/10/01
Ends	2015/11/13
Country	Portugal
Projects
Past projects	EMIF
Events
Proposals
Personal page

Publications

Articles in international journals listed in the ISI

• João Almeida, Luís Bastião Silva, Isabelle Bos, Pieter Jelle Visser, José Luís Oliveira. A methodology for cohort harmonisation in multicentre clinical research. Informatics in Medicine Unlocked, p. 100760, October 2021
• Rui Lebre, Luís Bastião Silva, Carlos Costa. A Cloud-ready Architecture for Shared Medical Imaging Repository. Journal of Digital Imaging, July 2020 [IF 2020: 4.056 (Q1)] [IF 2018: 2.572 (Q2, 51/129)]
• José Luís Oliveira, Alina Trifan, Luís Bastião Silva. EMIF Catalogue: A collaborative platform for sharing and reusing biomedical data. International Journal of Medical Informatics, vol. 126, p. 35-45, June 2019 [IF 2018: 2.731 (Q2, 57/155)]
• Milton Santos, Luís Bastião Silva, Augusto Silva, Nelson Rocha. DICOM Metadata Analysis for Population Studies. International Journal of E-Health and Medical Communications, vol. 10, no. 1, p. 1-17, January 2019
• Luís Bastião Silva, Alina Trifan, José Luís Oliveira. MONTRA: An agile architecture for data publishing and discovery. Computer Methods and Programs in Biomedicine, vol. 160, p. 33-42, April 2018 [IF 2018: 3.424 (Q1, 15/105)]
• Tiago Godinho, Rui Lebre, Luís Bastião Silva, Carlos Costa. An efficient architecture to support digital pathology in standard medical imaging repositories. Journal of Biomedical Informatics, vol. 71, p. 190-197, July 2017 [IF 2017: 2.882 (Q2, 28/105)] [IF 2018: 2.950 (Q2, 33/106)]
• Frederico Valente, Luís Bastião Silva, Tiago Godinho, Carlos Costa. Anatomy of an Extensible Open Source PACS. Journal of Digital Imaging, vol. 29, no. 3, p. 284-296, June 2016 [IF 2016: 1.407 (Q3, 88/127)] [IF 2018: 2.572 (Q2, 51/129)]
• Tiago Godinho, Carlos Viana Ferreira, Luís Bastião Silva, Carlos Costa. A Routing Mechanism for Cloud Outsourcing of Medical Imaging Repositories. IEEE Journal of Biomedical and Health Informatics, vol. 20, no. 1, p. 367-375, January 2016 [IF 2016: 3.451 (Q1, 20/146)]
• Pedro Lopes, Luís Bastião Silva, José Luís Oliveira. Challenges and Opportunities for Exploring Patient-Level Data. BioMed Research International, vol. 2015, no. 150435, p. 11 pages, August 2015 [IF 2015: 2.134 (Q3, 82/161)]
• Luís Bastião Silva, Luís Ribeiro, Milton Santos, Nuno Neves, Dulce Francisco, Carlos Costa, José Luís Oliveira. Normalizing Heterogeneous Medical Imaging Data to Measure the Impact of Radiation Dose. Journal of Digital Imaging, vol. 28, no. 6, p. 671-683, May 2015 [IF 2015: 1.406 (Q3, 91/124)] [IF 2018: 2.572 (Q2, 51/129)]
• Luís Bastião Silva, Samuel Campos, Carlos Costa, José Luís Oliveira. Sensor-Based Architecture for Medical Imaging Workflow Analysis. Journal of Medical Systems, vol. 38, p. 1-11, August 2014 [IF 2014: 2.213 (Q2, 7/24)] [IF 2018: 2.415 (Q2, 12/26)]
• Luís Bastião Silva, Renato Pinho, Luis Ribeiro, Carlos Costa, José Luís Oliveira. A Centralized Platform for Geo-Distributed PACS Management. Journal of Digital Imaging, vol. 27, no. 2, p. 165-173, April 2014 [IF 2014: 1.190 (Q4, 95/125)] [IF 2018: 2.572 (Q2, 51/129)]
• Luís Bastião Silva, Carlos Costa, José Luís Oliveira. A common API for delivering services over multi-vendor cloud resources. Journal of Systems and Software, vol. 86, no. 9, p. 2309–2317, September 2013 [IF 2013: 1.245 (Q2, 29/102)]
• Luís Bastião Silva, Carlos Costa, José Luís Oliveira. DICOM Relay over the Cloud. International Journal of Computer Assisted Radiology and Surgery, vol. 8, no. 3, p. 323-333, May 2013 [IF 2013: 1.659 (Q2, 84/204)]
• Luís Bastião Silva, Carlos Costa, José Luís Oliveira. A PACS archive architecture supported on Cloud services. International Journal of Computer Assisted Radiology and Surgery, vol. 7, no. 3, p. 349-358, May 2012 [IF 2012: 1.364 (Q3, 104/199)]
• Carlos Costa, Carlos Viana Ferreira, Luís Bastião Silva, Luis Ribeiro, Augusto Silva, José Luís Oliveira. Dicoogle - an Open Source Peer-to-Peer PACS. Journal of Digital Imaging, vol. 24, no. 5, p. 848-856, October 2011 [IF 2011: 1.255] [IF 2018: 2.572 (Q2, 51/129)]

Chapters in books

• Luís Bastião Silva, Carlos Costa, José Luís Oliveira. Regional PACS over the Cloud.. Líneas estratégicas de las Tecnologías de la Información y las Comunicaciones en Salud, CYTED, p. 21-32, 2013
• Milton Santos, Luís Bastião Silva, Carlos Costa, Augusto Silva, Nelson Rocha. Clinical Data Mining in Small Hospital PACS: Contributions for Radiology Department Improvement. Information Systems and Technologies for Enhancing Health and Social Care, IGI Global, vol. chapter 16, p. p236-251, March 2013
• Milton Santos, Luís Bastião Silva, Carlos Costa, Augusto Silva, Nelson Rocha. DICOM and Clinical Data Mining in a Small Hospital PACS: A Pilot Study. ENTERPRISE INFORMATION SYSTEMS - Centeris 2011, Maria Manuela Cruz-Cunha, João Varajão, Philip Powell and Ricardo Martinho (Ed.), Springer, vol. 221, p. 254-261, October 2011

Articles in conference proceedings

• Rui Lebre, Luís Bastião Silva, Carlos Costa. Decentralizing the storage of a DICOM compliant PACS. IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2021), December 2021
• João Almeida, Eriksson Monteiro, Luís Bastião Silva, Alejandro Pazos Sierra, José Luís Oliveira. A Recommender System to Help Discovering Cohorts in Rare Diseases. IEEE 33rd International Symposium on Computer-Based Medical Systems (CBMS), Rochester, MN, USA, p. 25-28, July 2020
• João Almeida, Eriksson Monteiro, Luís Bastião Silva, Alejandro Pazos, José Luís Oliveira. A Recommender System based on Cohorts' Similarity. 30th Medical Informatics Europe conference, MIE 2020, Studies in health technology and informatics, vol. 270, p. 1183-1184, April 2020
• Rui Lebre, Luís Bastião Silva, Carlos Costa. An Accounting Mechanism for Standard Medical Imaging Services. 2019 IEEE 6th Portuguese Meeting on Bioengineering (ENBENG), February 2019
• Rui Lebre, Tiago Godinho, Luís Bastião Silva, Carlos Costa. A performant and fully DICOM compliant Web PACS for Digital Pathology. 32th Computer Assisted Radiology and Surgery, vol. 32, 2018
• Rui Lebre, Luís Bastião Silva, Carlos Costa. Shared Medical Imaging Repositories. Studies in Health Technology and Informatics, vol. 247, 2018
• João Almeida, Tiago Godinho, Luís Bastião Silva, Carlos Costa, José Luís Oliveira. Services Orchestration and Workflow Management in Distributed Medical Imaging Environments. 2018 IEEE 31st International Symposium on Computer-Based Medical Systems (CBMS), Karlstad, Sweden, p. 170-175, June 2018
• Olga Fajarda, Luís Bastião Silva, Peter R Rijnbeek, Michel Van Speybroeck, José Luís Oliveira. A Methodology to Perform Semi-automatic Distributed EHR Database Queries. Proceedings of the 11th International Joint Conference on Biomedical Engineering Systems and Technologies HEALTHINF, Funchal, Madeira, Portugal, vol. 5, p. 127-134, January 2018
• Milton Santos, Luís Bastião Silva, Nelson Rocha, Augusto Silva. A multi­site head CT topogram acquisition protocol analysis based on DICOM metadata. European Congress of Radiology, 2017
• Tiago Godinho, Luís Bastião Silva, Carlos Costa. Integrating Multiple Data Sources in a Cardiology Imaging Laboratory. 18th International Conference on E-health Networking, Application & Services (HealthCom 2016), September 2016
• Pedro Matos, Luís Bastião Silva, Tiago Godinho, Carlos Costa. A dynamic approach to support interoperability for medical reports using DICOM SR. Medical Informatics Europe 2016 (MIE2016/HEC2016), August 2016
• Pedro Lopes, Luís Bastião Silva, José Luís Oliveira. i2x: an Automated Real-time Integration and Interoperability Platform. 8th IEEE International Conference on Service Oriented Computing & Applications (SOCA 2015), Rome, Italy, October 2015
• Luís Bastião Silva, Carlos Días, Johan van der Lei, José Luís Oliveira. Architecture to Summarize Patient-Level Data Across Borders and Countries. MEDINFO 2015, Brasil, vol. 216, p. 687-690, August 2015
• Pedro Lopes, Luís Bastião Silva, José Luís Oliveira. Challenges and opportunities for exploring patient-level data: Preliminary results. CISTI 2015 - 10ª Conferencia Ibérica de Sistemas y Tecnologías de Información, Portugal, p. 1-5, June 2015
• Luís Bastião Silva, Carlos Costa, José Luís Oliveira. Semantic search over DICOM repositories. IEEE International Conference on Healthcare Informatics 2014 (ICHI 2014), Verona, Italy, September 2014
• Tiago Godinho, Luís Bastião Silva, Carlos Costa, José Luís Oliveira. Multi-provider Architecture for Cloud Outsourcing of Medical Imaging Repositories. 25th European Medical Informatics Conference (MIE2014), Istambul, Turkey, August 2014
• Luís Bastião Silva, Milton Santos, Luis Ribeiro, Carlos Costa, José Luís Oliveira. Screening Radiation Exposure for Quality Assurance. 25th European Medical Informatics Conference (MIE2014), Istambul, Turkey, August 2014
• Eduardo Pinho, Luís Bastião Silva, Carlos Costa. A cloud service integration platform for web applications. High Performance Computing & Simulation (HPCS), 2014 International Conference on, Bologna, p. 366 - 373, July 2014
• Luís Bastião Silva, Louis Bernoud, Carlos Costa, José Luís Oliveira. NoSQL medical imaging archive: comparison between different implementations. IEEE International Conference on Biomedical and Health Informatics (BHI’14), Valencia, Spain, June 2014
• Luís Bastião Silva, Milton Santos, Carlos Costa, José Luís Oliveira. Normalizing medical imaging archives for dose quality assurance and productivity auditing. IEEE International Symposium on Medical Measurement and Applications (MeMeA 2014), Lisbon, Portugal, June 2014
• ...further results

PhD thesis

• Luís Bastião Silva. A federated architecture for biomedical data integration. PhD Thesis, Universidade de Aveiro, November 2015

Masters thesis

• Luís Bastião Silva. Serviços de Imagem Médica Suportados na Cloud. Masters Thesis, Universidade de Aveiro, July 2011