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• Jorge Miguel Silva, Diogo Pratas, Tânia Caetano, Sérgio Matos. The complexity landscape of viral genomes. GigaScience, vol. 11, August 2022 [IF 2018: 4.688 (Q1, 13/69)]
• Sara Pereira, Olga Fajarda, Sérgio Matos, José Luís Oliveira, Raquel Silva. NAPRT Expression Regulation Mechanisms: Novel Functions Predicted by a Bioinformatics Approach. Genes, vol. 12, no. 12, p. 2022, December 2021 [IF 2018: 3.331 (Q2, 61/174)]
• João Almeida, João Figueira Silva, Sérgio Matos, José Luís Oliveira. A two-stage workflow to extract and harmonize drug mentions from clinical notes into observational databases. Journal of Biomedical Informatics, vol. 120, p. 103849, August 2021 [IF 2018: 2.950 (Q2, 33/106)]
• Jorge Miguel Silva, Diogo Pratas, Rui Antunes, Sérgio Matos, Armando J. Pinho. Automatic analysis of artistic paintings using information-based measures. Pattern Recognition, p. 107864, February 2021 [IF 2018: 5.165 (Q1, 10/202)]
• João Figueira Silva, João Almeida, Sérgio Matos. Extraction of Family History Information From Clinical Notes: Deep Learning and Heuristics Approach. JMIR Medical Informatics, vol. 8, no. 12, December 2020 [IF 2020: 2.955 (Q3, 17/30)]
• Jorge Miguel Silva, Eduardo Pinho, Sérgio Matos, Diogo Pratas. Statistical Complexity Analysis of Turing Machine Tapes with Fixed Algorithmic Complexity Using the Best-Order Markov Model. Entropy, vol. 22, no. 1, January 2020 [IF 2018: 2.419 (Q2, 28/81)]
• Rui Antunes, Sérgio Matos. Extraction of chemical–protein interactions from the literature using neural networks and narrow instance representation. Database, vol. 2019, no. baz095, October 2019 [IF 2018: 3.683 (Q1, 7/59)]
• Rezarta Islamaj Doğan, Sun Kim, Andrew Chatr-aryamontri, Chih-Hsuan Wei, Donald C Comeau, Rui Antunes, Sérgio Matos, Qingyu Chen, Aparna Elangovan, Nagesh C Panyam, Karin Verspoor, Hongfang Liu, Yanshan Wang, Zhuang Liu, Berna Altınel, Zehra Melce Hüsünbeyi, Arzucan Özgür, Aris Fergadis, Chen-Kai Wang, Hong-Jie Dai, Tung Tran, Ramakanth Kavuluru, Ling Luo, Albert Steppi, Jinfeng Zhang, Jinchan Qu, Zhiyong Lu. Overview of the BioCreative VI Precision Medicine Track: mining protein interactions and mutations for precision medicine. Database, vol. 2019, no. bay147, January 2019 [IF 2018: 3.683 (Q1, 7/59)]
• Sérgio Matos. Configurable web-services for biomedical document annotation. Journal of Cheminformatics, vol. 10, p. 68, December 2018
• Micael Pedrosa, Jorge Miguel Silva, João Figueira Silva, Sérgio Matos, Carlos Costa. SCREEN-DR: Collaborative platform for diabetic retinopathy. International Journal of Medical Informatics, vol. 120, p. 137-146, December 2018 [IF 2018: 2.731 (Q2, 57/155)]
• Richard D Turner, Surinder S Birring, Mathina Darmalingam, Richard L Hooper, Heinke Kunst, Sérgio Matos, Graham H Bothamley. Daily cough frequency in tuberculosis and association with household infection. The International Journal of Tuberculosis and Lung Disease, vol. 22, no. 8, p. 863-870, August 2018
• Sérgio Matos, Rui Antunes. Protein-protein interaction article classification using a convolutional recurrent neural network with pre-trained word embeddings. Journal of Integrative Bioinformatics, vol. 14, no. 4, December 2017
• Rui Antunes, Sérgio Matos. Supervised learning and knowledge-based approaches applied to biomedical word sense disambiguation. Journal of Integrative Bioinformatics, vol. 14, no. 4, December 2017
• Arietta Spinou, Kai K Lee, Aish Sinha, Caroline Elston, Michael R Loebinger, Robert Wilson, Kian Fan Chung, Nadia Yousaf, Ian D Pavord, Sérgio Matos, Rachel Garrod, Surinder S Birring. The Objective Assessment of Cough Frequency in Bronchiectasis. Lung, vol. 195, no. 5, p. 575-585, October 2017
• Carlos Viana Ferreira, António Guerra, João Figueira Silva, Sérgio Matos, Carlos Costa. An Intelligent Cloud Storage Gateway for Medical Imaging. Journal of Medical Systems, vol. 41, no. 9, p. 141, September 2017 [IF 2017: 2.098 (Q2, 46/94)] [IF 2018: 2.415 (Q2, 12/26)]
• Kai K Lee, Sérgio Matos, Katie Ward, Gerrard F Rafferty, John Moxham, David H Evans, Surinder S Birring. Sound: a non-invasive measure of cough intensity. BMJ Open Respiratory Research, vol. 4, no. 1, p. e000178, May 2017
• Sun Kim, Rezarta Islamaj Doğan, Andrew Chatr-Aryamontri, Christie S. Chang, Rose Oughtred, Jennifer Rust, Riza Batista-Navarro, Jacob Carter, Sophia Ananiadou, Sérgio Matos, André Santos, David Campos, José Luís Oliveira, Onkar Singh, Jitendra Jonnagaddala, Hong-Jie Dai, Emily Chia-Yu Su, Yung-Chun Chang, Yu-Chen Su, Chun-Han Chu, Chien Chin Chen, Wen-Lian Hsu, Yifan Peng, Cecilia Arighi, Cathy H. Wu, K. Vijay-Shanker, Ferhat Aydın, Zehra Melce Hüsünbeyi, Arzucan Özgür, Soo-Yong Shin, Dongseop Kwon, Kara Dolinski, Mike Tyers, W. John Wilbur, and Donald C. Comeau. BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID. Database, vol. 2016, no. baw121, September 2016 [IF 2016: 3.290 (Q1, 8/57)] [IF 2018: 3.683 (Q1, 7/59)]
• Qinghua Wang, Shabbir S. Abdul, Lara Almeida, Sophia Ananiadou, Yalbi I. Balderas-Martínez, Riza Batista-Navarro, David Campos, Lucy Chilton, Hui-Jou Chou, Gabriela Contreras, Laurel Cooper, Hong-Jie Dai, Barbra Ferrell, Juliane Fluck, Socorro Gama-Castro, Nancy George, Georgios Gkoutos, Afroza K. Irin, Lars J. Jensen, Silvia Jimenez, Toni R. Jue, Ingrid Keseler, Sumit Madan, Sérgio Matos, Peter McQuilton, Marija Milacic, Matthew Mort, Jeyakumar Natarajan, Evangelos Pafilis, Emiliano Pereira, Shruti Rao, Fabio Rinaldi, Karen Rothfels, David Salgado, Raquel Silva, Onkar Singh, Raymund Stefancsik, Chu-Hsien Su, Suresh Subramani, Hamsa D. Tadepally, Loukia Tsaprouni, Nicole Vasilevsky, Xiaodong Wang, Andrew Chatr-Aryamontri, Stanley J. F. Laulederkind, Sherri Matis-Mitchell, Johanna McEntyre, Sandra Orchard, Sangya Pundir, Raul Rodriguez-Esteban, Kimberly Van Auken, Zhiyong Lu, Mary Schaeffer, Cathy H. Wu, Lynette Hirschman, and Cecilia N. Arighi. Overview of the interactive task in BioCreative V. Database, vol. 2016, p. baw119, September 2016 [IF 2016: 3.290 (Q1, 8/57)] [IF 2018: 3.683 (Q1, 7/59)]
• Sérgio Matos, David Campos, Renato Pinho, Raquel Silva, Matthew Mort, David N. Cooper, José Luís Oliveira. Mining clinical attributes of genomic variants through assisted literature curation in Egas. Database, vol. 2016, June 2016 [IF 2016: 3.290 (Q1, 8/57)] [IF 2018: 3.683 (Q1, 7/59)]
• Carlos Viana Ferreira, Luis Ribeiro, Sérgio Matos, Carlos Costa. Pattern Recognition for Cache Management in Distributed Medical Imaging Environments. International Journal of Computer Assisted Radiology and Surgery, vol. 11, no. 2, p. 327-336, February 2016 [IF 2016: 1.863 (Q2, 97/197)]